Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09175 N-((6-Methyl-5-oxo-3-thiomorpholinyl)carbonyl)-L-histidyl-L-proline 409.1415 410.1489 174
P13516 17-AAG 585.3021 586.3065 174
P32078 PA(20:4(6Z,8E,10E,14Z)-2OH(5S,12R)/18:4(6Z,9Z,12Z,15Z)) 748.4353 749.4432 174
P36912 Rhodojaponin IV 454.2533 455.2601 174
P39839 223.1261 224.1336 174
P40128 O-Demethylpuromycin 457.2031 458.2087 174
P42303 Swietenitin C 814.3052 815.3111 174
P43471 Huperzine T 277.1674 278.1738 174
P44943 Asparagoside C 740.4321 741.4375 174
P50462 Fungicide K 99-5278B 564.3682 565.3728 174

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G244100 Leucine aminopeptidase AT5G13520:AT5G13520:peptidase M1 family protein 0
Glyma.20G244300 hypothetical protein AT3G12620:AT3G12620:Protein phosphatase 2C family protein__AT3G55050:AT3G55050:Protein phosphatase 2C family protein 0
Glyma.20G244500 hypothetical protein AT1G51110:AT1G51110:Plastid-lipid associated protein PAP / fibrillin family protein 0
Glyma.20G244600 hypothetical protein NA 0
Glyma.20G244700 hypothetical protein AT5G19900:AT5G19900:PRLI-interacting factor 0
Glyma.20G244800 hypothetical protein AT5G13000:GSL12:glucan synthase-like 12 0
Glyma.20G245200 hypothetical protein NA 0
Glyma.20G245500 hypothetical protein AT4G14800:PBD2:20S proteasome beta subunit D2__AT3G22630:PBD1:20S proteasome beta subunit D1 0
Glyma.20G245700 hypothetical protein NA 0
Glyma.20G245800 hypothetical protein NA 0