Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P10912	Luzonoside A	624.2429	625.2544	131
P12415	Euojaponine C	887.2920	888.2965	131
P13473	Cussoracoside C	642.3166	643.3206	131
P15304	Threoninyl-Aspartate	234.0862	235.0941	131
P15354		868.2289	869.2321	131
P15647	Pyrithiamine	258.1525	259.1604	131
P19152	Lophocerine	249.1687	250.1776	131
P25817	Globuloside A	890.2955	891.2990	131
P26151		621.1448	622.1477	131
P27886	Pyripyropene E	451.2329	452.2392	131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G244100	Leucine aminopeptidase	AT5G13520:AT5G13520:peptidase M1 family protein
Glyma.20G244300	hypothetical protein	AT3G12620:AT3G12620:Protein phosphatase 2C family protein__AT3G55050:AT3G55050:Protein phosphatase 2C family protein
Glyma.20G244500	hypothetical protein	AT1G51110:AT1G51110:Plastid-lipid associated protein PAP / fibrillin family protein
Glyma.20G244600	hypothetical protein	NA
Glyma.20G244700	hypothetical protein	AT5G19900:AT5G19900:PRLI-interacting factor
Glyma.20G244800	hypothetical protein	AT5G13000:GSL12:glucan synthase-like 12
Glyma.20G245200	hypothetical protein	NA
Glyma.20G245500	hypothetical protein	AT4G14800:PBD2:20S proteasome beta subunit D2__AT3G22630:PBD1:20S proteasome beta subunit D1
Glyma.20G245700	hypothetical protein	NA
Glyma.20G245800	hypothetical protein	NA