Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28434 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1834 291.1921 152
P36874 755.3385 756.3510 152
P42174 Verbesinoside E 1056.5399 1057.5471 152
P07213 Boc-L-cysteine 221.0741 222.0824 151
P12840 Isobutyl beta-D-glucopyranoside 236.1250 237.1317 151
P18633 Butanedioic acid, octenyl- 228.1353 229.1411 151
P20625 Lamiuside D 816.2663 817.2710 151
P26089 Kni 102 595.2949 596.3000 151
P31937 173.1467 174.1553 151
P43039 10-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-decanoic acid 461.2433 462.2502 151

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G242700 hypothetical protein NA 0
Glyma.20G242800 hypothetical protein AT3G55070:AT3G55070:LisH/CRA/RING-U-box domains-containing protein 0
Glyma.20G242900 hypothetical protein AT5G39930:CLPS5:CLP1-similar protein 5__AT3G04680:CLPS3:CLP-similar protein 3 0
Glyma.20G243000 hypothetical protein AT3G55060:AT3G55060:CAP-gly domain linker__AT2G39300:AT2G39300:CAP-gly domain linker 0
Glyma.20G243300 hypothetical protein NA 0
Glyma.20G243400 Protoheme IX farnesyltransferase, mitochondrial AT2G44520:COX10:cytochrome c oxidase 10 0
Glyma.20G243600 hypothetical protein NA 0
Glyma.20G243700 hypothetical protein AT1G50480:THFS:10-formyltetrahydrofolate synthetase 0
Glyma.20G243800 hypothetical protein AT2G34860:EDA3:DnaJ/Hsp40 cysteine-rich domain superfamily protein 0
Glyma.20G244000 hypothetical protein AT3G13670:AT3G13670:Protein kinase family protein 0