Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P05765	Lycomarasmine B	277.0881	278.0973	165
P12117	Nutlin-3	580.1626	581.1677	165
P18034		276.1936	277.2003	165
P21529	Hosloppin	392.0948	393.1016	165
P22253		360.2841	361.2899	165
P22299	Pubescenine	495.2821	496.2855	165
P29912	O-Phosphoviomycin	765.2905	766.2988	165
P42723	CJ 15208	577.2763	578.2781	165
P45180		199.1326	200.1399	165
P45663	Kopsaporine	426.1785	427.1816	165

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G242700	hypothetical protein	NA
Glyma.20G242800	hypothetical protein	AT3G55070:AT3G55070:LisH/CRA/RING-U-box domains-containing protein
Glyma.20G242900	hypothetical protein	AT5G39930:CLPS5:CLP1-similar protein 5__AT3G04680:CLPS3:CLP-similar protein 3
Glyma.20G243000	hypothetical protein	AT3G55060:AT3G55060:CAP-gly domain linker__AT2G39300:AT2G39300:CAP-gly domain linker
Glyma.20G243300	hypothetical protein	NA
Glyma.20G243400	Protoheme IX farnesyltransferase, mitochondrial	AT2G44520:COX10:cytochrome c oxidase 10
Glyma.20G243600	hypothetical protein	NA
Glyma.20G243700	hypothetical protein	AT1G50480:THFS:10-formyltetrahydrofolate synthetase
Glyma.20G243800	hypothetical protein	AT2G34860:EDA3:DnaJ/Hsp40 cysteine-rich domain superfamily protein
Glyma.20G244000	hypothetical protein	AT3G13670:AT3G13670:Protein kinase family protein