Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03225 Chlorambucil-tertiary butyl ester 359.1400 360.1461 210
P05139 310.6259 311.6315 210
P27684 309.2743 310.2795 210
P04549 Cyclosulfamuron 421.1071 422.1091 209
P13108 Bms-707035 410.1081 411.1142 209
P14970 Benzonaphthazepine 243.1062 244.1135 209
P44253 285.6155 286.6223 209
P50982 Oleamide 281.2671 282.2752 209
P16775 PA(10:0/13:0) 522.3343 523.3435 208
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 517.2397 208

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G242700 hypothetical protein NA 0
Glyma.20G242800 hypothetical protein AT3G55070:AT3G55070:LisH/CRA/RING-U-box domains-containing protein 0
Glyma.20G242900 hypothetical protein AT5G39930:CLPS5:CLP1-similar protein 5__AT3G04680:CLPS3:CLP-similar protein 3 0
Glyma.20G243000 hypothetical protein AT3G55060:AT3G55060:CAP-gly domain linker__AT2G39300:AT2G39300:CAP-gly domain linker 0
Glyma.20G243300 hypothetical protein NA 0
Glyma.20G243400 Protoheme IX farnesyltransferase, mitochondrial AT2G44520:COX10:cytochrome c oxidase 10 0
Glyma.20G243600 hypothetical protein NA 0
Glyma.20G243700 hypothetical protein AT1G50480:THFS:10-formyltetrahydrofolate synthetase 0
Glyma.20G243800 hypothetical protein AT2G34860:EDA3:DnaJ/Hsp40 cysteine-rich domain superfamily protein 0
Glyma.20G244000 hypothetical protein AT3G13670:AT3G13670:Protein kinase family protein 0