Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09221 125.0522 126.0595 128
P09564 Penciclovir 253.1160 254.1232 128
P10493 2-Oxoquazepam 370.0498 371.0587 128
P12417 Chlorantene B 293.1261 294.1321 128
P14122 Ethylbenzene 106.0770 107.0848 128
P14373 Syncarpamide 457.1946 458.2002 128
P23258 Rel-5-hydroxy-7,4'-dimethoxy-2''S-(2,4,5-trimethoxy-E-styryl)-tetrahydrofuro[4''R,5''R:2,3]flavanonol 550.1803 551.1876 128
P28437 Fuscinarin 264.0988 265.1054 128
P28624 Hedychilactone A 318.2223 319.2304 128
P28829 O-Methyltubulosine 489.2945 490.2987 128

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G242700 hypothetical protein NA 0
Glyma.20G242800 hypothetical protein AT3G55070:AT3G55070:LisH/CRA/RING-U-box domains-containing protein 0
Glyma.20G242900 hypothetical protein AT5G39930:CLPS5:CLP1-similar protein 5__AT3G04680:CLPS3:CLP-similar protein 3 0
Glyma.20G243000 hypothetical protein AT3G55060:AT3G55060:CAP-gly domain linker__AT2G39300:AT2G39300:CAP-gly domain linker 0
Glyma.20G243300 hypothetical protein NA 0
Glyma.20G243400 Protoheme IX farnesyltransferase, mitochondrial AT2G44520:COX10:cytochrome c oxidase 10 0
Glyma.20G243600 hypothetical protein NA 0
Glyma.20G243700 hypothetical protein AT1G50480:THFS:10-formyltetrahydrofolate synthetase 0
Glyma.20G243800 hypothetical protein AT2G34860:EDA3:DnaJ/Hsp40 cysteine-rich domain superfamily protein 0
Glyma.20G244000 hypothetical protein AT3G13670:AT3G13670:Protein kinase family protein 0