Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P44143 Spenolimycin 346.1732 347.1809 129
P46495 Maximaisoflavone B 350.1150 351.1216 129
P47071 Chondramide A 646.3320 647.3399 129
P47983 697.4235 698.4278 129
P49645 Halistanol sulfate 688.2600 689.2620 129
P51555 5,7a-Dihydro-1,4,4,7a-tetramethyl-4H-indene 174.1404 175.1465 129
P54771 Inhibitor 50 435.0802 436.0893 129
P00240 Captopril-cysteine disulfide 336.0804 337.0872 128
P06891 2,5-Dimethylfuran 96.0572 97.0644 128
P07278 435.1175 436.1265 128

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G242700 hypothetical protein NA 0
Glyma.20G242800 hypothetical protein AT3G55070:AT3G55070:LisH/CRA/RING-U-box domains-containing protein 0
Glyma.20G242900 hypothetical protein AT5G39930:CLPS5:CLP1-similar protein 5__AT3G04680:CLPS3:CLP-similar protein 3 0
Glyma.20G243000 hypothetical protein AT3G55060:AT3G55060:CAP-gly domain linker__AT2G39300:AT2G39300:CAP-gly domain linker 0
Glyma.20G243300 hypothetical protein NA 0
Glyma.20G243400 Protoheme IX farnesyltransferase, mitochondrial AT2G44520:COX10:cytochrome c oxidase 10 0
Glyma.20G243600 hypothetical protein NA 0
Glyma.20G243700 hypothetical protein AT1G50480:THFS:10-formyltetrahydrofolate synthetase 0
Glyma.20G243800 hypothetical protein AT2G34860:EDA3:DnaJ/Hsp40 cysteine-rich domain superfamily protein 0
Glyma.20G244000 hypothetical protein AT3G13670:AT3G13670:Protein kinase family protein 0