Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G241700 hypothetical protein AT3G55120:TT5:Chalcone-flavanone isomerase family protein__AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0
Glyma.20G241800 hypothetical protein NA 0
Glyma.20G241900 hypothetical protein AT1G28060:AT1G28060:Pre-mRNA-splicing factor 3 0
Glyma.20G242000 hypothetical protein AT2G39350:ABCG1:ABC-2 type transporter family protein__AT3G55090:ABCG16:ABC-2 type transporter family protein__AT5G13580:ABCG6:ABC-2 type transporter family protein 0
Glyma.20G242100 hypothetical protein AT2G39340:SAC3A:SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0
Glyma.20G242200 hypothetical protein AT1G51390:NFU5:NFU domain protein 5__AT3G20970:NFU4:NFU domain protein 4 0
Glyma.20G242300 hypothetical protein NA 0
Glyma.20G242400 hypothetical protein NA 0
Glyma.20G242500 hypothetical protein NA 0
Glyma.20G242600 hypothetical protein NA 0