Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55291 (+)-Pyripyropene A 583.2480 584.2538 —
P55292 609.7012 610.7065 —
P55293 352.6007 353.6073 —
P55297 Triptregeline A 669.2503 670.2541 —
P55298 7-O-Methyl-N-deacetylipecoside 535.2337 536.2405 —
P55301 2-((2-Methoxy-2-(3-(trifluoromethyl)phenyl)ethyl)amino)ethyl 4-(2-(2-(9H-fluoren-9-yl)acetamido)ethyl)benzoate 616.2553 617.2592 —
P55303 16-Hydroxymilolide G 626.2577 627.2664 —
P55305 Pyronine Y 266.1428 267.1514 —
P55308 609.0335 610.0387 —
P55320 627.2615 628.2696 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G241700 hypothetical protein AT3G55120:TT5:Chalcone-flavanone isomerase family protein__AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0
Glyma.20G241800 hypothetical protein NA 0
Glyma.20G241900 hypothetical protein AT1G28060:AT1G28060:Pre-mRNA-splicing factor 3 0
Glyma.20G242000 hypothetical protein AT2G39350:ABCG1:ABC-2 type transporter family protein__AT3G55090:ABCG16:ABC-2 type transporter family protein__AT5G13580:ABCG6:ABC-2 type transporter family protein 0
Glyma.20G242100 hypothetical protein AT2G39340:SAC3A:SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0
Glyma.20G242200 hypothetical protein AT1G51390:NFU5:NFU domain protein 5__AT3G20970:NFU4:NFU domain protein 4 0
Glyma.20G242300 hypothetical protein NA 0
Glyma.20G242400 hypothetical protein NA 0
Glyma.20G242500 hypothetical protein NA 0
Glyma.20G242600 hypothetical protein NA 0