Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54876 603.2250 604.2295 —
P54879 531.3880 532.3948 —
P54880 360.2884 361.2940 —
P54883 N-Linoleoyl Valine 379.3058 380.3127 —
P54893 606.8184 607.8238 —
P54895 844.0016 845.0097 —
P54899 Ligurobustoside O 622.2595 623.2642 —
P54900 606.0010 607.0054 —
P54902 NADPH 745.0835 746.0902 —
P54903 606.8463 607.8539 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G241700 hypothetical protein AT3G55120:TT5:Chalcone-flavanone isomerase family protein__AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0
Glyma.20G241800 hypothetical protein NA 0
Glyma.20G241900 hypothetical protein AT1G28060:AT1G28060:Pre-mRNA-splicing factor 3 0
Glyma.20G242000 hypothetical protein AT2G39350:ABCG1:ABC-2 type transporter family protein__AT3G55090:ABCG16:ABC-2 type transporter family protein__AT5G13580:ABCG6:ABC-2 type transporter family protein 0
Glyma.20G242100 hypothetical protein AT2G39340:SAC3A:SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0
Glyma.20G242200 hypothetical protein AT1G51390:NFU5:NFU domain protein 5__AT3G20970:NFU4:NFU domain protein 4 0
Glyma.20G242300 hypothetical protein NA 0
Glyma.20G242400 hypothetical protein NA 0
Glyma.20G242500 hypothetical protein NA 0
Glyma.20G242600 hypothetical protein NA 0