Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09497 2,5-Dimethylfuran 96.0575 97.0642 193
P10553 299.1808 300.1868 193
P18019 AH 135Y 291.1104 292.1177 193
P29144 2-Hexyl-5-methyl-3(2H)-furanone 182.1294 183.1365 193
P37333 Xanthobaccin C 494.2826 495.2901 193
P40190 Tasumatrol F 632.2808 633.2882 193
P40307 Dolaconine 419.2601 420.2671 193
P00145 Limonenecarboxylic acid 180.1121 181.1181 192
P01028 Lamiridosin A 260.0890 261.0946 192
P03908 438.5879 439.5923 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G241700 hypothetical protein AT3G55120:TT5:Chalcone-flavanone isomerase family protein__AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0
Glyma.20G241800 hypothetical protein NA 0
Glyma.20G241900 hypothetical protein AT1G28060:AT1G28060:Pre-mRNA-splicing factor 3 0
Glyma.20G242000 hypothetical protein AT2G39350:ABCG1:ABC-2 type transporter family protein__AT3G55090:ABCG16:ABC-2 type transporter family protein__AT5G13580:ABCG6:ABC-2 type transporter family protein 0
Glyma.20G242100 hypothetical protein AT2G39340:SAC3A:SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0
Glyma.20G242200 hypothetical protein AT1G51390:NFU5:NFU domain protein 5__AT3G20970:NFU4:NFU domain protein 4 0
Glyma.20G242300 hypothetical protein NA 0
Glyma.20G242400 hypothetical protein NA 0
Glyma.20G242500 hypothetical protein NA 0
Glyma.20G242600 hypothetical protein NA 0