Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08409 Hydroxydesmthyl doxepin glucuronide 471.1930 472.1991 113
P09805 ES 242-1 604.2235 605.2299 113
P11463 5-Megastigmen-7-yne-3,9-diol 9-glucoside 370.1959 371.2038 113
P12004 N-(1-Deoxy-1-fructosyl)tyrosine 343.1239 344.1305 113
P12768 883.3117 884.3193 113
P18966 Notoamide H 479.2104 480.2136 113
P19107 862.2377 863.2433 113
P20003 14,15-Dihydroxygelsenicine 358.1544 359.1638 113
P20634 Euphoscopin F 538.2526 539.2633 113
P22004 (E)-2-Tridecene-4,6,8-triyn-1-ol 186.1055 187.1138 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G241700 hypothetical protein AT3G55120:TT5:Chalcone-flavanone isomerase family protein__AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0
Glyma.20G241800 hypothetical protein NA 0
Glyma.20G241900 hypothetical protein AT1G28060:AT1G28060:Pre-mRNA-splicing factor 3 0
Glyma.20G242000 hypothetical protein AT2G39350:ABCG1:ABC-2 type transporter family protein__AT3G55090:ABCG16:ABC-2 type transporter family protein__AT5G13580:ABCG6:ABC-2 type transporter family protein 0
Glyma.20G242100 hypothetical protein AT2G39340:SAC3A:SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0
Glyma.20G242200 hypothetical protein AT1G51390:NFU5:NFU domain protein 5__AT3G20970:NFU4:NFU domain protein 4 0
Glyma.20G242300 hypothetical protein NA 0
Glyma.20G242400 hypothetical protein NA 0
Glyma.20G242500 hypothetical protein NA 0
Glyma.20G242600 hypothetical protein NA 0