Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11739 THF-L-glutamate 574.2136 575.2230 144
P11990 Methyl 18-bromo-5,6-trans-endomethylene-7,11,15-trimethyl-8E,10Z-octadecadien-17-ynoate 422.1803 423.1876 144
P15141 N-(2-Methylbutyl)-2E-undecene-8,10-diynamide 245.1779 246.1853 144
P15383 (7R)-7-(5-Carboxy-5-oxopentanoyl)aminocephalosporinate 414.0740 415.0813 144
P23163 Urdamycinone F 504.1630 505.1692 144
P23229 Isariotin E 377.2268 378.2342 144
P24964 1066.3562 1067.3588 144
P27877 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.1949 607.2039 144
P33592 521.2494 522.2539 144
P34785 4'-(beta-D-Glucopyranosyloxy)-7',8'-dihydro-4,4'-diapo-psi,psi-caroten-4-oic acid 608.3368 609.3435 144

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G240600 hypothetical protein AT2G39420:AT2G39420:alpha/beta-Hydrolases superfamily protein__AT3G55180:AT3G55180:alpha/beta-Hydrolases superfamily protein__AT2G39410:AT2G39410:alpha/beta-Hydrolases superfamily protein__AT2G39400:AT2G39400:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G240700 hypothetical protein NA 0
Glyma.20G240800 hypothetical protein AT3G55140:AT3G55140:Pectin lyase-like superfamily protein 0
Glyma.20G240900 hypothetical protein NA 0
Glyma.20G241000 hypothetical protein NA 0
Glyma.20G241100 hypothetical protein AT1G43900:AT1G43900:Protein phosphatase 2C family protein 0
Glyma.20G241200 hypothetical protein AT3G12360:ITN1:Ankyrin repeat family protein 0
Glyma.20G241400 hypothetical protein AT5G13560:AT5G13560:structural maintenance of chromosomes protein 0
Glyma.20G241500 CHI1A AT3G55120:TT5:Chalcone-flavanone isomerase family protein 0
Glyma.20G241600 CHI1B1 AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0