Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G240600 hypothetical protein AT2G39420:AT2G39420:alpha/beta-Hydrolases superfamily protein__AT3G55180:AT3G55180:alpha/beta-Hydrolases superfamily protein__AT2G39410:AT2G39410:alpha/beta-Hydrolases superfamily protein__AT2G39400:AT2G39400:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G240700 hypothetical protein NA 0
Glyma.20G240800 hypothetical protein AT3G55140:AT3G55140:Pectin lyase-like superfamily protein 0
Glyma.20G240900 hypothetical protein NA 0
Glyma.20G241000 hypothetical protein NA 0
Glyma.20G241100 hypothetical protein AT1G43900:AT1G43900:Protein phosphatase 2C family protein 0
Glyma.20G241200 hypothetical protein AT3G12360:ITN1:Ankyrin repeat family protein 0
Glyma.20G241400 hypothetical protein AT5G13560:AT5G13560:structural maintenance of chromosomes protein 0
Glyma.20G241500 CHI1A AT3G55120:TT5:Chalcone-flavanone isomerase family protein 0
Glyma.20G241600 CHI1B1 AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0