Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13499 2-Aminoindan 133.0884 134.0953 109
P16011 Dibenzo-P-dioxin 402.1820 403.1913 109
P16450 Herbarumin II 244.1296 245.1355 109
P17257 Clibadiolide 778.3857 779.3905 109
P19615 Biapenem 350.1055 351.1144 109
P20371 694.0848 695.0881 109
P21143 U 77802 820.2298 821.2375 109
P22945 Saframycin B 537.2019 538.2138 109
P25648 Triamcinolone hexacetonide 532.2833 533.2898 109
P29256 Annulatophenonoside 408.1070 409.1124 109

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G240600 hypothetical protein AT2G39420:AT2G39420:alpha/beta-Hydrolases superfamily protein__AT3G55180:AT3G55180:alpha/beta-Hydrolases superfamily protein__AT2G39410:AT2G39410:alpha/beta-Hydrolases superfamily protein__AT2G39400:AT2G39400:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G240700 hypothetical protein NA 0
Glyma.20G240800 hypothetical protein AT3G55140:AT3G55140:Pectin lyase-like superfamily protein 0
Glyma.20G240900 hypothetical protein NA 0
Glyma.20G241000 hypothetical protein NA 0
Glyma.20G241100 hypothetical protein AT1G43900:AT1G43900:Protein phosphatase 2C family protein 0
Glyma.20G241200 hypothetical protein AT3G12360:ITN1:Ankyrin repeat family protein 0
Glyma.20G241400 hypothetical protein AT5G13560:AT5G13560:structural maintenance of chromosomes protein 0
Glyma.20G241500 CHI1A AT3G55120:TT5:Chalcone-flavanone isomerase family protein 0
Glyma.20G241600 CHI1B1 AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0