Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35928 Aloesone 7-O-glucoside 394.1231 395.1310 119
P36374 561.7929 562.7980 119
P37083 Sialyl-Le(a) oligosaccharide 1102.3780 1103.3803 119
P39162 FR 235222 556.3236 557.3294 119
P39954 852.2852 853.2931 119
P42881 Leupeptin 426.2931 427.3011 119
P43367 803.8936 804.9006 119
P43949 Serratezomine A 279.1813 280.1891 119
P44457 Montanastatin 740.4230 741.4366 119
P46832 dodecyl 2-methylpropanoate 256.2380 257.2448 119

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G240600 hypothetical protein AT2G39420:AT2G39420:alpha/beta-Hydrolases superfamily protein__AT3G55180:AT3G55180:alpha/beta-Hydrolases superfamily protein__AT2G39410:AT2G39410:alpha/beta-Hydrolases superfamily protein__AT2G39400:AT2G39400:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G240700 hypothetical protein NA 0
Glyma.20G240800 hypothetical protein AT3G55140:AT3G55140:Pectin lyase-like superfamily protein 0
Glyma.20G240900 hypothetical protein NA 0
Glyma.20G241000 hypothetical protein NA 0
Glyma.20G241100 hypothetical protein AT1G43900:AT1G43900:Protein phosphatase 2C family protein 0
Glyma.20G241200 hypothetical protein AT3G12360:ITN1:Ankyrin repeat family protein 0
Glyma.20G241400 hypothetical protein AT5G13560:AT5G13560:structural maintenance of chromosomes protein 0
Glyma.20G241500 CHI1A AT3G55120:TT5:Chalcone-flavanone isomerase family protein 0
Glyma.20G241600 CHI1B1 AT5G66220:AT5G66220:Chalcone-flavanone isomerase family protein 0