Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P17438 725.1565 726.1623 139
P19352 Kaempferol 3-apiosyl-(1->2)-glucoside-4'-glucoside 742.1996 743.2109 139
P19709 Aclacinomycin Y 809.3265 810.3350 139
P24220 3',4'-Dihydroxy-7-methoxy-8-(3-methylbut-2-enyl)-2'''-(1-hydroxy-1-methylethyl)-furano-(4'',5'':6,5)favanone 452.1801 453.1889 139
P26278 Miraziridine A 668.3922 669.3989 139
P27540 Delavaconine 393.2469 394.2532 139
P31644 8-(2,4-Dichlorophenyl)-N-(1,3-dimethoxypropan-2-yl)-2,7-dimethylpyrazolo[5,1-f][1,3,5]triazin-4-amine 409.1141 410.1208 139
P32493 Glunicate 704.1931 705.2046 139
P38985 Mucronulatol-(4->5')-vestitol 572.1988 573.2085 139
P39827 531.2999 532.3078 139

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G239600 hypothetical protein NA 0
Glyma.20G239700 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 0
Glyma.20G239800 hypothetical protein AT2G39480:ABCB6:P-glycoprotein 6 0
Glyma.20G239900 hypothetical protein NA 0
Glyma.20G240000 hypothetical protein AT3G55260:HEXO1:beta-hexosaminidase 1 0
Glyma.20G240100 hypothetical protein AT3G55240:AT3G55240:Plant protein 1589 of unknown function__AT3G28990:AT3G28990:Plant protein 1589 of unknown function 0
Glyma.20G240200 hypothetical protein NA 0
Glyma.20G240300 DHAR4 DHAR class glutathione S-transferase AT1G19550:AT1G19550:Glutathione S-transferase family protein__AT1G75270:DHAR2:dehydroascorbate reductase 2 0
Glyma.20G240400 hypothetical protein AT1G80480:PTAC17:plastid transcriptionally active 17 0
Glyma.20G240500 hypothetical protein AT3G55220:SAP130b:Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 0