Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22734 Apigenosylide A 858.3447 859.3527 142
P32552 Briaexcavatolide N 480.1962 481.2002 142
P43465 907.9905 908.9925 142
P44266 Tylosin B 771.4372 772.4436 142
P53116 243.8782 244.8856 142
P04648 (5S)-5-(7-Benzofuranyl)-8-chloro-3-methyl-1,2,4,5-tetrahydro-3-benzazepin-7-ol 327.1057 328.1121 141
P05425 Flucythrinate 451.1546 452.1637 141
P06073 Indol-3-ylacetyl-myo-inositol L-arabinoside 469.1542 470.1624 141
P07929 Glycozolone A 252.1271 253.1325 141
P09365 Leucyl-Aspartate 246.1187 247.1238 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G239600 hypothetical protein NA 0
Glyma.20G239700 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 0
Glyma.20G239800 hypothetical protein AT2G39480:ABCB6:P-glycoprotein 6 0
Glyma.20G239900 hypothetical protein NA 0
Glyma.20G240000 hypothetical protein AT3G55260:HEXO1:beta-hexosaminidase 1 0
Glyma.20G240100 hypothetical protein AT3G55240:AT3G55240:Plant protein 1589 of unknown function__AT3G28990:AT3G28990:Plant protein 1589 of unknown function 0
Glyma.20G240200 hypothetical protein NA 0
Glyma.20G240300 DHAR4 DHAR class glutathione S-transferase AT1G19550:AT1G19550:Glutathione S-transferase family protein__AT1G75270:DHAR2:dehydroascorbate reductase 2 0
Glyma.20G240400 hypothetical protein AT1G80480:PTAC17:plastid transcriptionally active 17 0
Glyma.20G240500 hypothetical protein AT3G55220:SAP130b:Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 0