Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35928 Aloesone 7-O-glucoside 394.1231 395.1310 119
P36374 561.7929 562.7980 119
P37083 Sialyl-Le(a) oligosaccharide 1102.3780 1103.3803 119
P39162 FR 235222 556.3236 557.3294 119
P39954 852.2852 853.2931 119
P42881 Leupeptin 426.2931 427.3011 119
P43367 803.8936 804.9006 119
P43949 Serratezomine A 279.1813 280.1891 119
P44457 Montanastatin 740.4230 741.4366 119
P46832 dodecyl 2-methylpropanoate 256.2380 257.2448 119

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G239600 hypothetical protein NA 0
Glyma.20G239700 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 0
Glyma.20G239800 hypothetical protein AT2G39480:ABCB6:P-glycoprotein 6 0
Glyma.20G239900 hypothetical protein NA 0
Glyma.20G240000 hypothetical protein AT3G55260:HEXO1:beta-hexosaminidase 1 0
Glyma.20G240100 hypothetical protein AT3G55240:AT3G55240:Plant protein 1589 of unknown function__AT3G28990:AT3G28990:Plant protein 1589 of unknown function 0
Glyma.20G240200 hypothetical protein NA 0
Glyma.20G240300 DHAR4 DHAR class glutathione S-transferase AT1G19550:AT1G19550:Glutathione S-transferase family protein__AT1G75270:DHAR2:dehydroascorbate reductase 2 0
Glyma.20G240400 hypothetical protein AT1G80480:PTAC17:plastid transcriptionally active 17 0
Glyma.20G240500 hypothetical protein AT3G55220:SAP130b:Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 0