Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P16525 Isoginkgetin 7-O-beta-D-glucopyranoside 728.1731 729.1824 115
P19420 Homoneoharringtonine 549.2405 550.2453 115
P19653 750.2553 751.2633 115
P19780 Lappaol D 568.2302 569.2391 115
P20216 Histidylhistidine 292.1273 293.1352 115
P21207 Dapriamicin A 511.1949 512.2013 115
P22565 Androstane-3,17-diol 17-sulfate 372.1984 373.2057 115
P22629 N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-naphthylbenzoyl-(L)-leucine, TFA 465.2079 466.2159 115
P22895 FD 212 268.1299 269.1362 115
P23137 Fentrazamide 349.1306 350.1360 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G238500 hypothetical protein AT2G40650:AT2G40650:PRP38 family protein 0
Glyma.20G238600 hypothetical protein AT4G11060:MTSSB:mitochondrially targeted single-stranded DNA binding protein 0
Glyma.20G238700 hypothetical protein AT1G09160:AT1G09160:Protein phosphatase 2C family protein 0
Glyma.20G238800 hypothetical protein AT3G05670:AT3G05670:RING/U-box protein 0
Glyma.20G239000 hypothetical protein NA 0
Glyma.20G239100 hypothetical protein AT3G05710:SYP43:syntaxin of plants 43__AT5G26980:SYP41:syntaxin of plants 41 0
Glyma.20G239200 hypothetical protein NA 0
Glyma.20G239300 hypothetical protein AT1G56310:AT1G56310:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0
Glyma.20G239400 hypothetical protein AT5G26910:TRM8:GPI-anchored adhesin-like protein 0
Glyma.20G239500 hypothetical protein AT3G62630:F26K9_60: 0