Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11240 6-Benzylaminopurine 225.1038 226.1090 123
P15609 2-Isopropylfuran 110.0718 111.0795 123
P15845 Nigrospoxydon C 294.0747 295.0816 123
P17541 17-Ethynyl-16-fluoroestradiol 314.1689 315.1765 123
P17713 939.2673 940.2706 123
P20071 Melochinone 331.1571 332.1663 123
P26120 1,2-dinonanoyl-sn-glycero-3-phosphocholine 537.3455 538.3528 123
P30440 2-Isopropylfuran 110.0717 111.0792 123
P32052 Zanamivir 332.1327 333.1402 123
P33021 7-O-Methyl-N-deacetylipecoside 535.2335 536.2382 123

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G238500 hypothetical protein AT2G40650:AT2G40650:PRP38 family protein 0
Glyma.20G238600 hypothetical protein AT4G11060:MTSSB:mitochondrially targeted single-stranded DNA binding protein 0
Glyma.20G238700 hypothetical protein AT1G09160:AT1G09160:Protein phosphatase 2C family protein 0
Glyma.20G238800 hypothetical protein AT3G05670:AT3G05670:RING/U-box protein 0
Glyma.20G239000 hypothetical protein NA 0
Glyma.20G239100 hypothetical protein AT3G05710:SYP43:syntaxin of plants 43__AT5G26980:SYP41:syntaxin of plants 41 0
Glyma.20G239200 hypothetical protein NA 0
Glyma.20G239300 hypothetical protein AT1G56310:AT1G56310:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0
Glyma.20G239400 hypothetical protein AT5G26910:TRM8:GPI-anchored adhesin-like protein 0
Glyma.20G239500 hypothetical protein AT3G62630:F26K9_60: 0