Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P17438 725.1565 726.1623 139
P19352 Kaempferol 3-apiosyl-(1->2)-glucoside-4'-glucoside 742.1996 743.2109 139
P19709 Aclacinomycin Y 809.3265 810.3350 139
P24220 3',4'-Dihydroxy-7-methoxy-8-(3-methylbut-2-enyl)-2'''-(1-hydroxy-1-methylethyl)-furano-(4'',5'':6,5)favanone 452.1801 453.1889 139
P26278 Miraziridine A 668.3922 669.3989 139
P27540 Delavaconine 393.2469 394.2532 139
P31644 8-(2,4-Dichlorophenyl)-N-(1,3-dimethoxypropan-2-yl)-2,7-dimethylpyrazolo[5,1-f][1,3,5]triazin-4-amine 409.1141 410.1208 139
P32493 Glunicate 704.1931 705.2046 139
P38985 Mucronulatol-(4->5')-vestitol 572.1988 573.2085 139
P39827 531.2999 532.3078 139

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G235800 hypothetical protein AT3G62770:AtATG18a:Transducin/WD40 repeat-like superfamily protein 0
Glyma.20G235900 hypothetical protein NA 0
Glyma.20G236000 ATP-dependent DNA helicase Q-like SIM AT5G27680:RECQSIM:RECQ helicase SIM 0
Glyma.20G236100 hypothetical protein AT3G05470:AT3G05470:Actin-binding FH2 (formin homology 2) family protein 0
Glyma.20G236200 hypothetical protein AT1G09090:RBOHB:respiratory burst oxidase-like protein 0
Glyma.20G236300 hypothetical protein NA 0
Glyma.20G236500 hypothetical protein NA 0
Glyma.20G236600 hypothetical protein AT3G05540:AT3G05540:Methionine sulfoxide reductase (MSS4-like) family protein 0
Glyma.20G236800 Serine/arginine-rich splicing factor SR30 AT1G09140:SR30:SERINE-ARGININE PROTEIN 30 0
Glyma.20G237000 hypothetical protein NA 0