Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P44143 Spenolimycin 346.1732 347.1809 129
P46495 Maximaisoflavone B 350.1150 351.1216 129
P47071 Chondramide A 646.3320 647.3399 129
P47983 697.4235 698.4278 129
P49645 Halistanol sulfate 688.2600 689.2620 129
P51555 5,7a-Dihydro-1,4,4,7a-tetramethyl-4H-indene 174.1404 175.1465 129
P54771 Inhibitor 50 435.0802 436.0893 129
P00240 Captopril-cysteine disulfide 336.0804 337.0872 128
P06891 2,5-Dimethylfuran 96.0572 97.0644 128
P07278 435.1175 436.1265 128

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G235800 hypothetical protein AT3G62770:AtATG18a:Transducin/WD40 repeat-like superfamily protein 0
Glyma.20G235900 hypothetical protein NA 0
Glyma.20G236000 ATP-dependent DNA helicase Q-like SIM AT5G27680:RECQSIM:RECQ helicase SIM 0
Glyma.20G236100 hypothetical protein AT3G05470:AT3G05470:Actin-binding FH2 (formin homology 2) family protein 0
Glyma.20G236200 hypothetical protein AT1G09090:RBOHB:respiratory burst oxidase-like protein 0
Glyma.20G236300 hypothetical protein NA 0
Glyma.20G236500 hypothetical protein NA 0
Glyma.20G236600 hypothetical protein AT3G05540:AT3G05540:Methionine sulfoxide reductase (MSS4-like) family protein 0
Glyma.20G236800 Serine/arginine-rich splicing factor SR30 AT1G09140:SR30:SERINE-ARGININE PROTEIN 30 0
Glyma.20G237000 hypothetical protein NA 0