Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40016 Avermectin B1b 858.4721 859.4824 172
P41635 CDP-DG(22:6(4Z,7Z,10Z,12E,16Z,19Z)-OH(14)/i-19:0) 1083.5609 1084.5672 172
P43604 10-ethoxy-2methylene-10-oxodecanoic acid 242.1481 243.1568 172
P44158 (3-Methyl-2-butenyl)-benzene 146.1085 147.1159 172
P17040 L-Arginine phosphate 254.0761 255.0845 171
P18481 Eugenetin 220.0742 221.0801 171
P24176 (R)-2-Methylimino-1-phenylpropan-1-ol 163.1025 164.1104 171
P42932 1798.9760 900.5001 171
P50359 Decarbamoylneosaxitoxin 272.1221 273.1277 171
P01939 (2-Ethylcrotonoyl)urea 156.0876 157.0950 170

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G234000 hypothetical protein AT5G27560:AT5G27560:DUF1995 domain protein, putative (DUF1995) 0
Glyma.20G234100 hypothetical protein AT5G27550:AT5G27550:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G234200 hypothetical protein AT3G05330:ATN:cyclin family 0
Glyma.20G234300 hypothetical protein AT1G55000:AT1G55000:peptidoglycan-binding LysM domain-containing protein 0
Glyma.20G234400 hypothetical protein NA 0
Glyma.20G234900 hypothetical protein NA 0
Glyma.20G235100 hypothetical protein NA 0
Glyma.20G235200 hypothetical protein AT3G05410:AT3G05410:Photosystem II reaction center PsbP family protein 0
Glyma.20G235600 hypothetical protein NA 0
Glyma.20G235700 hypothetical protein AT3G05430:AT3G05430:Tudor/PWWP/MBT superfamily protein 0