Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P20244	(+)-Trehazolin	366.1291	367.1369	140
P22618	(Z)-3-Hexenyl 3-methylbutanoate	184.1453	185.1523	140
P26724	Arginylthreonine	275.1606	276.1676	140
P28637		630.7857	631.7925	140
P32826	Aszonalenin	373.1797	374.1870	140
P33750	6,8-Epoxy-p-menthane	154.1356	155.1413	140
P34054	Scandenolide	334.1041	335.1106	140
P35584	Maetenoside B	1202.5971	1203.6044	140
P44811	Fargoside D	778.4074	779.4157	140
P46204	SB 311009	408.2576	409.2666	140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G232600		hypothetical protein	NA
Glyma.20G232700		hypothetical protein	NA
Glyma.20G232800		hypothetical protein	AT3G05250:AT3G05250:RING/U-box superfamily protein
Glyma.20G232900		hypothetical protein	AT1G08980:AMI1:amidase 1
Glyma.20G233000	PM34	seed maturation protein PM34	AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein
Glyma.20G233200		hypothetical protein	AT1G54920:AT1G54920:uncharacterized protein
Glyma.20G233300		hypothetical protein	AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase
Glyma.20G233500		hypothetical protein	AT5G27490:AT5G27490:Integral membrane Yip1 family protein
Glyma.20G233600		hypothetical protein	NA
Glyma.20G233800		hypothetical protein	AT3G22660:AT3G22660:rRNA processing protein-like protein