Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P38174	Azaspiracid 13	859.4835	860.4922	240
P40405		659.3981	660.4063	239
P00636		157.9538	158.9609	238
P12469	2,5-Dimethylfuran	96.0568	97.0643	238
P22595	Mucronulatol-(4->5')-vestitol	572.1981	573.2085	238
P38652	Mollicellin M	416.0708	417.0813	238
P14214	Decarbamoylgonyautoxin 1	368.0761	369.0806	237
P22578		583.1306	584.1392	237
P30643	Tetralin	132.0926	133.1001	237
P13409		706.1236	707.1314	236

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G232600		hypothetical protein	NA
Glyma.20G232700		hypothetical protein	NA
Glyma.20G232800		hypothetical protein	AT3G05250:AT3G05250:RING/U-box superfamily protein
Glyma.20G232900		hypothetical protein	AT1G08980:AMI1:amidase 1
Glyma.20G233000	PM34	seed maturation protein PM34	AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein
Glyma.20G233200		hypothetical protein	AT1G54920:AT1G54920:uncharacterized protein
Glyma.20G233300		hypothetical protein	AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase
Glyma.20G233500		hypothetical protein	AT5G27490:AT5G27490:Integral membrane Yip1 family protein
Glyma.20G233600		hypothetical protein	NA
Glyma.20G233800		hypothetical protein	AT3G22660:AT3G22660:rRNA processing protein-like protein