Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G232600 hypothetical protein NA 0
Glyma.20G232700 hypothetical protein NA 0
Glyma.20G232800 hypothetical protein AT3G05250:AT3G05250:RING/U-box superfamily protein 0
Glyma.20G232900 hypothetical protein AT1G08980:AMI1:amidase 1 0
Glyma.20G233000 PM34 seed maturation protein PM34 AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G233200 hypothetical protein AT1G54920:AT1G54920:uncharacterized protein 0
Glyma.20G233300 hypothetical protein AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase 0
Glyma.20G233500 hypothetical protein AT5G27490:AT5G27490:Integral membrane Yip1 family protein 0
Glyma.20G233600 hypothetical protein NA 0
Glyma.20G233800 hypothetical protein AT3G22660:AT3G22660:rRNA processing protein-like protein 0