Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G232600 hypothetical protein NA 0
Glyma.20G232700 hypothetical protein NA 0
Glyma.20G232800 hypothetical protein AT3G05250:AT3G05250:RING/U-box superfamily protein 0
Glyma.20G232900 hypothetical protein AT1G08980:AMI1:amidase 1 0
Glyma.20G233000 PM34 seed maturation protein PM34 AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G233200 hypothetical protein AT1G54920:AT1G54920:uncharacterized protein 0
Glyma.20G233300 hypothetical protein AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase 0
Glyma.20G233500 hypothetical protein AT5G27490:AT5G27490:Integral membrane Yip1 family protein 0
Glyma.20G233600 hypothetical protein NA 0
Glyma.20G233800 hypothetical protein AT3G22660:AT3G22660:rRNA processing protein-like protein 0