Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G232600 hypothetical protein NA 0
Glyma.20G232700 hypothetical protein NA 0
Glyma.20G232800 hypothetical protein AT3G05250:AT3G05250:RING/U-box superfamily protein 0
Glyma.20G232900 hypothetical protein AT1G08980:AMI1:amidase 1 0
Glyma.20G233000 PM34 seed maturation protein PM34 AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G233200 hypothetical protein AT1G54920:AT1G54920:uncharacterized protein 0
Glyma.20G233300 hypothetical protein AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase 0
Glyma.20G233500 hypothetical protein AT5G27490:AT5G27490:Integral membrane Yip1 family protein 0
Glyma.20G233600 hypothetical protein NA 0
Glyma.20G233800 hypothetical protein AT3G22660:AT3G22660:rRNA processing protein-like protein 0