Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28501 433.2605 434.2679 177
P28558 400.6988 401.7068 177
P29734 Stemphyloxin I 382.2333 383.2392 177
P30823 181.0450 182.0523 177
P38200 4-(2-Chlorophenoxy)-N-[3-(methylcarbamoyl)phenyl]piperidine-1-carboxamide 387.1344 388.1406 177
P39722 Pellynol H 510.3657 511.3732 177
P43007 407.3600 408.3681 177
P43793 Acetyl-alpha-methylfentanyl 336.2200 337.2268 177
P45177 Fargoside D 778.4081 779.4154 177
P05243 5'-Deoxy-5'-fluoroadenosine 269.0921 270.0999 176

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G232600 hypothetical protein NA 0
Glyma.20G232700 hypothetical protein NA 0
Glyma.20G232800 hypothetical protein AT3G05250:AT3G05250:RING/U-box superfamily protein 0
Glyma.20G232900 hypothetical protein AT1G08980:AMI1:amidase 1 0
Glyma.20G233000 PM34 seed maturation protein PM34 AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G233200 hypothetical protein AT1G54920:AT1G54920:uncharacterized protein 0
Glyma.20G233300 hypothetical protein AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase 0
Glyma.20G233500 hypothetical protein AT5G27490:AT5G27490:Integral membrane Yip1 family protein 0
Glyma.20G233600 hypothetical protein NA 0
Glyma.20G233800 hypothetical protein AT3G22660:AT3G22660:rRNA processing protein-like protein 0