Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02131 Eustifoline D 221.0836 222.0913 182
P24545 5-Methoxy-3,4-methylenedioxyamphetamine 209.1042 210.1126 182
P37572 28-Glucosyloleanolic acid 3-[rhamnosyl-(1->2)-galactosyl-(1->3)-glucuronide] 1116.5415 1117.5463 182
P43306 102.0458 103.0535 182
P05454 Leonuriside A 332.1106 333.1163 181
P06475 (+)-5,17-Dehydromatrine N-oxide 262.1661 263.1722 181
P16872 Methyl-4-O-caffeoylquinate 368.1086 369.1180 181
P21471 Illifunone C 252.1331 253.1413 181
P33036 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1495 271.1555 181
P52796 Famprofazone 377.2443 378.2528 181

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G232600 hypothetical protein NA 0
Glyma.20G232700 hypothetical protein NA 0
Glyma.20G232800 hypothetical protein AT3G05250:AT3G05250:RING/U-box superfamily protein 0
Glyma.20G232900 hypothetical protein AT1G08980:AMI1:amidase 1 0
Glyma.20G233000 PM34 seed maturation protein PM34 AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G233200 hypothetical protein AT1G54920:AT1G54920:uncharacterized protein 0
Glyma.20G233300 hypothetical protein AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase 0
Glyma.20G233500 hypothetical protein AT5G27490:AT5G27490:Integral membrane Yip1 family protein 0
Glyma.20G233600 hypothetical protein NA 0
Glyma.20G233800 hypothetical protein AT3G22660:AT3G22660:rRNA processing protein-like protein 0