Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P09497	2,5-Dimethylfuran	96.0575	97.0642	193
P10553		299.1808	300.1868	193
P18019	AH 135Y	291.1104	292.1177	193
P29144	2-Hexyl-5-methyl-3(2H)-furanone	182.1294	183.1365	193
P37333	Xanthobaccin C	494.2826	495.2901	193
P40190	Tasumatrol F	632.2808	633.2882	193
P40307	Dolaconine	419.2601	420.2671	193
P00145	Limonenecarboxylic acid	180.1121	181.1181	192
P01028	Lamiridosin A	260.0890	261.0946	192
P03908		438.5879	439.5923	192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G232600		hypothetical protein	NA
Glyma.20G232700		hypothetical protein	NA
Glyma.20G232800		hypothetical protein	AT3G05250:AT3G05250:RING/U-box superfamily protein
Glyma.20G232900		hypothetical protein	AT1G08980:AMI1:amidase 1
Glyma.20G233000	PM34	seed maturation protein PM34	AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein
Glyma.20G233200		hypothetical protein	AT1G54920:AT1G54920:uncharacterized protein
Glyma.20G233300		hypothetical protein	AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase
Glyma.20G233500		hypothetical protein	AT5G27490:AT5G27490:Integral membrane Yip1 family protein
Glyma.20G233600		hypothetical protein	NA
Glyma.20G233800		hypothetical protein	AT3G22660:AT3G22660:rRNA processing protein-like protein