Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P05722	(-)-Echinobetaine A	175.1198	176.1263	111
P06706	Nitrazine	233.1234	234.1308	111
P06915		682.1883	683.1935	111
P08742		153.0759	154.0846	111
P09330	Aclatonium	217.1286	218.1356	111
P09922	Voxelotor	337.1410	338.1475	111
P11202		577.1808	578.1882	111
P11491	Kaempferol 7,4'-dimethyl ether 3-O-sulfate	394.0315	395.0366	111
P11603	HC 70III	455.2224	456.2292	111
P12384	2-(4-methoxyphenyl)ethanol	152.0846	153.0919	111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G232600		hypothetical protein	NA
Glyma.20G232700		hypothetical protein	NA
Glyma.20G232800		hypothetical protein	AT3G05250:AT3G05250:RING/U-box superfamily protein
Glyma.20G232900		hypothetical protein	AT1G08980:AMI1:amidase 1
Glyma.20G233000	PM34	seed maturation protein PM34	AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein
Glyma.20G233200		hypothetical protein	AT1G54920:AT1G54920:uncharacterized protein
Glyma.20G233300		hypothetical protein	AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase
Glyma.20G233500		hypothetical protein	AT5G27490:AT5G27490:Integral membrane Yip1 family protein
Glyma.20G233600		hypothetical protein	NA
Glyma.20G233800		hypothetical protein	AT3G22660:AT3G22660:rRNA processing protein-like protein