Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P45656	Aglain B	630.2840	631.2925	117
P45744		366.6513	367.6565	117
P53375	N(6)-Monobutyryladenosine	337.1396	338.1472	117
P53643		662.1493	663.1566	117
P54509	n2-Acetyl,n6-methyllysine	202.1324	203.1390	117
P04587	Methionyl-Glutamate	278.0937	279.1010	116
P13464	Tripterygiumine T	693.2310	694.2329	116
P17580	Swietenidin B	205.0721	206.0796	116
P22655	Candoxatrilat	399.2293	400.2366	116
P25819	Thonzylamine	286.1743	287.1822	116

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

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Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G232600		hypothetical protein	NA
Glyma.20G232700		hypothetical protein	NA
Glyma.20G232800		hypothetical protein	AT3G05250:AT3G05250:RING/U-box superfamily protein
Glyma.20G232900		hypothetical protein	AT1G08980:AMI1:amidase 1
Glyma.20G233000	PM34	seed maturation protein PM34	AT3G05260:AT3G05260:NAD(P)-binding Rossmann-fold superfamily protein
Glyma.20G233200		hypothetical protein	AT1G54920:AT1G54920:uncharacterized protein
Glyma.20G233300		hypothetical protein	AT5G27470:AT5G27470:seryl-tRNA synthetase / serine-tRNA ligase
Glyma.20G233500		hypothetical protein	AT5G27490:AT5G27490:Integral membrane Yip1 family protein
Glyma.20G233600		hypothetical protein	NA
Glyma.20G233800		hypothetical protein	AT3G22660:AT3G22660:rRNA processing protein-like protein