Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13883 Kaempferol 3-O-caffeoyl-sophoroside 7-O-glucoside 934.2391 935.2481 158
P29430 Benzaldehyde 106.0416 107.0484 158
P41373 3-Benzoyloxy-6-oxo-12-ursen-28-oic acid 574.3653 575.3707 158
P45179 Spicataxine 669.3432 670.3494 158
P50043 2,5-Dimethylfuran 96.0579 97.0652 158
P05656 6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine 289.1577 290.1655 157
P22528 Adiposin 2 661.2467 662.2558 157
P29660 Artemether 298.1742 299.1810 157
P34088 2'-O-(alpha-D-Manp)-6'-O-(alpha-D-Manp-1->6-alpha-D-Manp)-(1-heptadecanoyl-sn-glycero-3-phospho-1'-myo-inositol) 1072.4778 1073.4820 157
P36081 173.1252 174.1316 157

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G231300 hypothetical protein NA 0
Glyma.20G231400 hypothetical protein AT5G27395:AT5G27395:Mitochondrial inner membrane translocase complex, subunit Tim44-related protein 0
Glyma.20G231500 hypothetical protein NA 0
Glyma.20G231600 hypothetical protein AT1G54780:TLP18.3:thylakoid lumen 18.3 kDa protein 0
Glyma.20G231800 hypothetical protein NA 0
Glyma.20G231900 hypothetical protein AT3G05200:ATL6:RING/U-box superfamily protein 0
Glyma.20G232200 hypothetical protein AT3G05220:AT3G05220:Heavy metal transport/detoxification superfamily protein 0
Glyma.20G232300 hypothetical protein AT3G05230:AT3G05230:Signal peptidase subunit 0
Glyma.20G232400 hypothetical protein NA 0
Glyma.20G232500 hypothetical protein AT1G54840:AT1G54840:HSP20-like chaperones superfamily protein 0