Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08554 Jasminoside A 330.1644 331.1724 127
P10082 Trifuhalol B 390.0587 391.0660 127
P10739 Antibiotic D 788-7 515.1878 516.1962 127
P10870 Isorhamnetin 3-sophoroside-7-glucoside 802.2147 803.2205 127
P12319 Didemethylcitalopram 296.1334 297.1412 127
P13946 Ethyl (E)-3-diethoxyphosphinothioyloxybut-2-enoate 282.0724 283.0815 127
P14285 Triethylene glycol dimethacrylate 286.1392 287.1451 127
P19144 4-Fluoro-1-[2-[(4-methyl-1-methylsulfonylpiperidin-4-yl)amino]acetyl]pyrrolidine-2-carbonitrile 346.1459 347.1558 127
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 965.2932 127
P21706 dTDP-4-hydroxyamino-4,6-dideoxy-alpha-D-glucose 563.1008 564.1089 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G231300 hypothetical protein NA 0
Glyma.20G231400 hypothetical protein AT5G27395:AT5G27395:Mitochondrial inner membrane translocase complex, subunit Tim44-related protein 0
Glyma.20G231500 hypothetical protein NA 0
Glyma.20G231600 hypothetical protein AT1G54780:TLP18.3:thylakoid lumen 18.3 kDa protein 0
Glyma.20G231800 hypothetical protein NA 0
Glyma.20G231900 hypothetical protein AT3G05200:ATL6:RING/U-box superfamily protein 0
Glyma.20G232200 hypothetical protein AT3G05220:AT3G05220:Heavy metal transport/detoxification superfamily protein 0
Glyma.20G232300 hypothetical protein AT3G05230:AT3G05230:Signal peptidase subunit 0
Glyma.20G232400 hypothetical protein NA 0
Glyma.20G232500 hypothetical protein AT1G54840:AT1G54840:HSP20-like chaperones superfamily protein 0