Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11794 Okaramine A 520.2462 521.2532 150
P15410 Epicoccin F 456.0445 457.0534 150
P17687 YC 170 487.1624 488.1707 150
P19015 Pentacarboxylporphyrin I 698.2651 699.2674 150
P19348 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 123.1158 150
P19926 563.2107 564.2191 150
P22333 (6E)-8-Oxogeraniol 168.1139 169.1209 150
P23057 Fantofarone 550.2490 551.2553 150
P25306 Ligujapone 202.1007 203.1090 150
P26391 Plusbacin A1 1129.5298 1130.5357 150

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G230300 hypothetical protein NA 0
Glyma.20G230400 hypothetical protein NA 0
Glyma.20G230500 hypothetical protein AT2G26430:RCY1:arginine-rich cyclin 1 0
Glyma.20G230600 hypothetical protein AT3G05120:GID1A:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G230700 hypothetical protein AT3G05130:AT3G05130:paramyosin-like protein 0
Glyma.20G230800 hypothetical protein NA 0
Glyma.20G230900 hypothetical protein AT1G54710:ATG18H:autophagy 18h-like protein 0
Glyma.20G231000 hypothetical protein AT3G05140:RBK2:ROP binding protein kinases 2 0
Glyma.20G231100 hypothetical protein NA 0
Glyma.20G231200 hypothetical protein NA 0