Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P38997 Xanthobaccin B 512.2927 513.3014 113
P39126 Fruticosonine 312.2196 313.2285 113
P40099 Alanylproline 186.1024 187.1107 113
P42277 2beta-Hydroxytestosterone 304.2005 305.2076 113
P46449 Rapisterone 508.3341 509.3406 113
P51427 11E,14E-Octadecadienal 264.2418 265.2500 113
P55331 Juncin H 642.2343 643.2410 113
P55588 Hanburinone 626.2685 627.2796 113
P02264 Succinic anhydride 100.0157 101.0225 112
P03530 Thiamin monophosphate 344.0706 345.0792 112

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G230300 hypothetical protein NA 0
Glyma.20G230400 hypothetical protein NA 0
Glyma.20G230500 hypothetical protein AT2G26430:RCY1:arginine-rich cyclin 1 0
Glyma.20G230600 hypothetical protein AT3G05120:GID1A:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G230700 hypothetical protein AT3G05130:AT3G05130:paramyosin-like protein 0
Glyma.20G230800 hypothetical protein NA 0
Glyma.20G230900 hypothetical protein AT1G54710:ATG18H:autophagy 18h-like protein 0
Glyma.20G231000 hypothetical protein AT3G05140:RBK2:ROP binding protein kinases 2 0
Glyma.20G231100 hypothetical protein NA 0
Glyma.20G231200 hypothetical protein NA 0