Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P29744 Miraziridine A 668.3944 669.3997 128
P32247 6-Amino-9-benzyl-2-(2-methoxyethoxy)-9H-purin-8-ol 315.1328 316.1393 128
P36550 PGP(18:1(9Z)/6 keto-PGF1alpha) 942.4871 943.4926 128
P39433 3'-Hydroxy T-2 toxin 482.2170 483.2228 128
P41604 561.7429 562.7470 128
P46992 2-Amino-4-hydroxy-6,7-dimethyl-5,6,7,8-tetrahydropteridine 195.1118 196.1184 128
P02554 Hygrocin B 507.1927 508.1967 127
P04997 Imazapyr 261.1122 262.1191 127
P06840 13-Hydroxypalmatine 367.1410 368.1487 127
P07347 Coumanolignan 318.1268 319.1321 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G230300 hypothetical protein NA 0
Glyma.20G230400 hypothetical protein NA 0
Glyma.20G230500 hypothetical protein AT2G26430:RCY1:arginine-rich cyclin 1 0
Glyma.20G230600 hypothetical protein AT3G05120:GID1A:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G230700 hypothetical protein AT3G05130:AT3G05130:paramyosin-like protein 0
Glyma.20G230800 hypothetical protein NA 0
Glyma.20G230900 hypothetical protein AT1G54710:ATG18H:autophagy 18h-like protein 0
Glyma.20G231000 hypothetical protein AT3G05140:RBK2:ROP binding protein kinases 2 0
Glyma.20G231100 hypothetical protein NA 0
Glyma.20G231200 hypothetical protein NA 0