Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P29609 3,6-Dimethyl-1,4-dioxane-2,5-dione 144.0418 289.0912 118
P29808 Benzofuran ketone 144.0213 145.0278 118
P30820 Streptovaricin C 769.3197 770.3196 118
P32784 (3S)-7-Hydroxy-8,2',3',4',5'-pentamethoxyisoflavan 376.1503 377.1588 118
P34642 Adenolin D 422.2247 423.2291 118
P34893 Glomosporin 973.4902 974.5006 118
P35506 Heptanoylcholine 215.1858 216.1932 118
P35645 Endomorphin-1 610.2903 611.2985 118
P36728 Dihydroxytryptamine 192.0904 193.0976 118
P37690 Mono-trans-p-coumaroylmesotartaric acid 310.0668 311.0742 118

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G229200 hypothetical protein NA 0
Glyma.20G229300 hypothetical protein NA 0
Glyma.20G229400 hypothetical protein NA 0
Glyma.20G229500 hypothetical protein AT1G08720:EDR1:Protein kinase superfamily protein 0
Glyma.20G229600 hypothetical protein AT5G27950:AT5G27950:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G229700 hypothetical protein NA 0
Glyma.20G229800 hypothetical protein AT3G05050:AT3G05050:Protein kinase superfamily protein 0
Glyma.20G229900 hypothetical protein AT3G05030:NHX2:sodium hydrogen exchanger 2 0
Glyma.20G230000 hypothetical protein AT3G05010:Cand2:Protein of unknown function, transmembrane-40 0
Glyma.20G230100 hypothetical protein NA 0