Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28918 Trienomycin E 610.3503 611.3588 126
P29106 PGP(PGE2/22:5(7Z,10Z,13Z,16Z,19Z)) 972.4792 973.4887 126
P29714 Saframycin C 567.2128 568.2235 126
P30517 Ethambutol 204.1848 205.1925 126
P33934 1-(1-Phenylcyclohexyl)-4-hydroxypiperidine 259.1929 260.1990 126
P34061 p-Formylbenzoic acid 150.0310 151.0378 126
P34329 Rhopaladin B 370.1112 371.1158 126
P34873 (R)-2-Methylimino-1-phenylpropan-1-ol 163.0982 164.1054 126
P35765 Foetidissimoside A 1058.5215 1059.5351 126
P42290 446.1690 447.1777 126

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G229200 hypothetical protein NA 0
Glyma.20G229300 hypothetical protein NA 0
Glyma.20G229400 hypothetical protein NA 0
Glyma.20G229500 hypothetical protein AT1G08720:EDR1:Protein kinase superfamily protein 0
Glyma.20G229600 hypothetical protein AT5G27950:AT5G27950:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G229700 hypothetical protein NA 0
Glyma.20G229800 hypothetical protein AT3G05050:AT3G05050:Protein kinase superfamily protein 0
Glyma.20G229900 hypothetical protein AT3G05030:NHX2:sodium hydrogen exchanger 2 0
Glyma.20G230000 hypothetical protein AT3G05010:Cand2:Protein of unknown function, transmembrane-40 0
Glyma.20G230100 hypothetical protein NA 0