Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48148 N-(15Z-tetracosenoyl) taurine 473.3565 474.3625 110
P49298 Glycyltyrosine 238.0921 239.0980 110
P52035 cis-Communal 286.2267 287.2342 110
P54535 (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile 202.1223 203.1291 110
P00974 Sertraline 305.0751 306.0843 109
P04848 Nitrobenzene 123.0319 124.0390 109
P06573 7-Hydroxyfluphenazine 453.1741 454.1800 109
P08590 Aspartyl-Aspartate 248.0653 249.0725 109
P09565 Fendosal 381.1405 382.1481 109
P10671 Endothal-disodium 186.0520 187.0588 109

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G228100 hypothetical protein AT3G04920:AT3G04920:Ribosomal protein S24e family protein 0
Glyma.20G228300 hypothetical protein AT3G04930:AT3G04930:DNA-binding storekeeper protein-related transcriptional regulator 0
Glyma.20G228400 hypothetical protein NA 0
Glyma.20G228500 hypothetical protein NA 0
Glyma.20G228600 hypothetical protein NA 0
Glyma.20G228700 hypothetical protein AT1G54490:XRN4:exoribonuclease 4 0
Glyma.20G228800 hypothetical protein NA 0
Glyma.20G228900 hypothetical protein AT5G28030:DES1:L-cysteine desulfhydrase 1 0
Glyma.20G229000 hypothetical protein AT5G28020:CYSD2:cysteine synthase D2 0
Glyma.20G229100 hypothetical protein AT5G27970:AT5G27970:ARM repeat superfamily protein 0