Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P47541 | 3R-hydroxy-14R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-pentadecanoic acid | 547.3248 | 548.3360 | 133 |
| P49951 | (6E,8E,10R,12Z)-10-Hydroxy-3-oxooctadecatrienoic acid | 308.2041 | 309.2129 | 133 |
| P52735 | Cypendazole | 329.1478 | 330.1538 | 133 |
| P00905 | Metiazinic acid | 271.0675 | 272.0757 | 132 |
| P02658 | 5,7,3',4',5'-Pentahydroxyflavanone | 304.0541 | 305.0611 | 132 |
| P02741 | Parbendazole | 247.1324 | 248.1384 | 132 |
| P04385 | 5-Hydroxy-3,4,7-triphenyl-2,6-benzofurandione | 392.1077 | 393.1155 | 132 |
| P05960 | 559.1606 | 560.1669 | 132 | |
| P07338 | Cedpht | 304.1446 | 305.1509 | 132 |
| P07617 | Nitrogen mustard | 155.0286 | 156.0359 | 132 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.20G227100 | hypothetical protein | NA | 0 | |
| Glyma.20G227200 | hypothetical protein | AT1G08600:ATRX:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 0 | |
| Glyma.20G227300 | hypothetical protein | AT3G04350:AT3G04350:vacuolar sorting-associated protein (DUF946) | 0 | |
| Glyma.20G227400 | hypothetical protein | NA | 0 | |
| Glyma.20G227500 | hypothetical protein | AT3G04380:SUVR4:SET-domain containing protein lysine methyltransferase family protein | 0 | |
| Glyma.20G227600 | hypothetical protein | NA | 0 | |
| Glyma.20G227700 | hypothetical protein | NA | 0 | |
| Glyma.20G227800 | hypothetical protein | AT3G04890:AT3G04890:adenine phosphoribosyltransferase-like protein, putative (DUF2358) | 0 | |
| Glyma.20G227900 | hypothetical protein | AT3G04870:ZDS:zeta-carotene desaturase | 0 | |
| Glyma.20G228000 | WNK1 | serine/threonine-protein kinase WNK1 | AT3G04910:WNK1:with no lysine (K) kinase 1__AT5G28080:WNK9:Protein kinase superfamily protein | 0 |