Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09654 2-Hydroxyfelbamate 254.0901 255.0955 141
P16359 197.1097 198.1162 141
P17680 Glycosmisic acid 372.1197 373.1259 141
P21082 (2S)-2-Amino-4-sulfanylbutanal 119.0422 120.0490 141
P26911 1-(9Z-octadecenoyl)-2-(4,7-dioxo-5E-heptenoyl)-sn-glycero-3-phospho-(1'-myo-inositol) 736.3391 737.3480 141
P27176 FD 212 268.1287 269.1370 141
P27832 Mabiogenin 3-[rhamnosyl-(1->6)-glucoside] 796.4504 797.4579 141
P29828 4'-Oxonebramine 304.1730 305.1785 141
P32281 Aristolindiquinone 218.0561 219.0635 141
P37322 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1294 219.1361 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G227100 hypothetical protein NA 0
Glyma.20G227200 hypothetical protein AT1G08600:ATRX:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G227300 hypothetical protein AT3G04350:AT3G04350:vacuolar sorting-associated protein (DUF946) 0
Glyma.20G227400 hypothetical protein NA 0
Glyma.20G227500 hypothetical protein AT3G04380:SUVR4:SET-domain containing protein lysine methyltransferase family protein 0
Glyma.20G227600 hypothetical protein NA 0
Glyma.20G227700 hypothetical protein NA 0
Glyma.20G227800 hypothetical protein AT3G04890:AT3G04890:adenine phosphoribosyltransferase-like protein, putative (DUF2358) 0
Glyma.20G227900 hypothetical protein AT3G04870:ZDS:zeta-carotene desaturase 0
Glyma.20G228000 WNK1 serine/threonine-protein kinase WNK1 AT3G04910:WNK1:with no lysine (K) kinase 1__AT5G28080:WNK9:Protein kinase superfamily protein 0