Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54757 stigmast-5-en-3beta-yl (3E-pentenoate) 496.4182 497.4269 —
P54758 Ser-Leu-Ile-Gly-Lys-Val 615.4030 616.4081 —
P54762 Crambescin A 448.3499 449.3575 —
P54764 Sodwanone B 484.3229 485.3327 —
P54765 Limonenecarboxylic acid 180.1139 181.1211 —
P54766 Benzanthrin A 634.2907 635.2923 —
P54767 Viburtinal 160.0510 161.0590 —
P54768 Ajugapantin A 550.2417 551.2507 —
P54775 113.9490 114.9570 —
P54777 Sideretin 224.0327 225.0403 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G227100 hypothetical protein NA 0
Glyma.20G227200 hypothetical protein AT1G08600:ATRX:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G227300 hypothetical protein AT3G04350:AT3G04350:vacuolar sorting-associated protein (DUF946) 0
Glyma.20G227400 hypothetical protein NA 0
Glyma.20G227500 hypothetical protein AT3G04380:SUVR4:SET-domain containing protein lysine methyltransferase family protein 0
Glyma.20G227600 hypothetical protein NA 0
Glyma.20G227700 hypothetical protein NA 0
Glyma.20G227800 hypothetical protein AT3G04890:AT3G04890:adenine phosphoribosyltransferase-like protein, putative (DUF2358) 0
Glyma.20G227900 hypothetical protein AT3G04870:ZDS:zeta-carotene desaturase 0
Glyma.20G228000 WNK1 serine/threonine-protein kinase WNK1 AT3G04910:WNK1:with no lysine (K) kinase 1__AT5G28080:WNK9:Protein kinase superfamily protein 0