Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24428 Talniflumate 414.0784 415.0855 205
P25466 Niazinin 343.1126 344.1185 205
P15762 Aristoloterpenate II 527.1950 528.2020 204
P03342 D-Alanyl-alanyl-poly(glycerolphosphate) 314.0858 315.0931 203
P05821 Pandangolide 3 362.1408 363.1478 203
P12578 4E,6E-undecenal 166.1341 167.1417 203
P14723 1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine 691.3337 692.3416 203
P53229 Leurubicin 656.2476 657.2525 203
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 497.1062 202
P39176 Microtoenin C 941.5023 942.5093 202

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G227100 hypothetical protein NA 0
Glyma.20G227200 hypothetical protein AT1G08600:ATRX:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G227300 hypothetical protein AT3G04350:AT3G04350:vacuolar sorting-associated protein (DUF946) 0
Glyma.20G227400 hypothetical protein NA 0
Glyma.20G227500 hypothetical protein AT3G04380:SUVR4:SET-domain containing protein lysine methyltransferase family protein 0
Glyma.20G227600 hypothetical protein NA 0
Glyma.20G227700 hypothetical protein NA 0
Glyma.20G227800 hypothetical protein AT3G04890:AT3G04890:adenine phosphoribosyltransferase-like protein, putative (DUF2358) 0
Glyma.20G227900 hypothetical protein AT3G04870:ZDS:zeta-carotene desaturase 0
Glyma.20G228000 WNK1 serine/threonine-protein kinase WNK1 AT3G04910:WNK1:with no lysine (K) kinase 1__AT5G28080:WNK9:Protein kinase superfamily protein 0