Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04657 Isopongaflavone 334.1227 335.1294 188
P06843 Leptanthin 286.0773 287.0845 188
P11295 3,5-Dihydroxyphenyl 1-O-(6-O-galloyl-beta-D-glucopyranoside) 440.0962 441.1006 188
P21336 Quercetin 3-(6''-ethylglucuronide) 506.1066 507.1119 188
P29799 Chaetoxanthone C 390.0909 391.0987 188
P31693 589.2530 590.2594 188
P33310 Ternatin C5 874.1936 875.2042 188
P46593 Chrotacumine B 387.1647 388.1710 188
P47225 Planktocyclin 800.4334 801.4318 188
P04106 N-Trifluoroacetyladriamycinol 641.1784 642.1889 187

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G226100 hypothetical protein NA 0
Glyma.20G226200 hypothetical protein NA 0
Glyma.20G226300 hypothetical protein NA 0
Glyma.20G226400 hypothetical protein NA 0
Glyma.20G226500 hypothetical protein AT5G28640:AN3:SSXT family protein 0
Glyma.20G226600 hypothetical protein AT1G08730:XIC:Myosin family protein with Dil domain-containing protein__AT1G54560:XIE:Myosin family protein with Dil domain-containing protein 0
Glyma.20G226700 hypothetical protein AT5G32470:AT5G32470:heme oxygenase-like, multi-helical 0
Glyma.20G226800 hypothetical protein AT5G18480:PGSIP6:plant glycogenin-like starch initiation protein 6 0
Glyma.20G226900 hypothetical protein AT1G08590:AT1G08590:Leucine-rich receptor-like protein kinase family protein 0
Glyma.20G227000 hypothetical protein AT3G04340:emb2458:FtsH extracellular protease family 0