Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04039 Pefloxacin 333.1503 334.1597 122
P06493 108.0797 109.0874 122
P08837 Cysteinyl-Alanine 192.0555 193.0617 122
P09246 4-Hydroxy-6-methyl-3-(1-oxobutyl)-2H-pyran-2-one 196.0737 197.0816 122
P09299 Cervinomycin A1 529.1419 530.1458 122
P09538 2-Pyridylacetic acid 137.0481 138.0549 122
P15127 Quin-2 acetoxymethyl ester 829.2553 830.2621 122
P16385 Silafluofen 408.1926 409.2002 122
P19876 Catharine 822.3819 823.3906 122
P19976 BMS 181532 711.1701 712.1772 122

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G226100 hypothetical protein NA 0
Glyma.20G226200 hypothetical protein NA 0
Glyma.20G226300 hypothetical protein NA 0
Glyma.20G226400 hypothetical protein NA 0
Glyma.20G226500 hypothetical protein AT5G28640:AN3:SSXT family protein 0
Glyma.20G226600 hypothetical protein AT1G08730:XIC:Myosin family protein with Dil domain-containing protein__AT1G54560:XIE:Myosin family protein with Dil domain-containing protein 0
Glyma.20G226700 hypothetical protein AT5G32470:AT5G32470:heme oxygenase-like, multi-helical 0
Glyma.20G226800 hypothetical protein AT5G18480:PGSIP6:plant glycogenin-like starch initiation protein 6 0
Glyma.20G226900 hypothetical protein AT1G08590:AT1G08590:Leucine-rich receptor-like protein kinase family protein 0
Glyma.20G227000 hypothetical protein AT3G04340:emb2458:FtsH extracellular protease family 0