Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P29744 Miraziridine A 668.3944 669.3997 128
P32247 6-Amino-9-benzyl-2-(2-methoxyethoxy)-9H-purin-8-ol 315.1328 316.1393 128
P36550 PGP(18:1(9Z)/6 keto-PGF1alpha) 942.4871 943.4926 128
P39433 3'-Hydroxy T-2 toxin 482.2170 483.2228 128
P41604 561.7429 562.7470 128
P46992 2-Amino-4-hydroxy-6,7-dimethyl-5,6,7,8-tetrahydropteridine 195.1118 196.1184 128
P02554 Hygrocin B 507.1927 508.1967 127
P04997 Imazapyr 261.1122 262.1191 127
P06840 13-Hydroxypalmatine 367.1410 368.1487 127
P07347 Coumanolignan 318.1268 319.1321 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G226100 hypothetical protein NA 0
Glyma.20G226200 hypothetical protein NA 0
Glyma.20G226300 hypothetical protein NA 0
Glyma.20G226400 hypothetical protein NA 0
Glyma.20G226500 hypothetical protein AT5G28640:AN3:SSXT family protein 0
Glyma.20G226600 hypothetical protein AT1G08730:XIC:Myosin family protein with Dil domain-containing protein__AT1G54560:XIE:Myosin family protein with Dil domain-containing protein 0
Glyma.20G226700 hypothetical protein AT5G32470:AT5G32470:heme oxygenase-like, multi-helical 0
Glyma.20G226800 hypothetical protein AT5G18480:PGSIP6:plant glycogenin-like starch initiation protein 6 0
Glyma.20G226900 hypothetical protein AT1G08590:AT1G08590:Leucine-rich receptor-like protein kinase family protein 0
Glyma.20G227000 hypothetical protein AT3G04340:emb2458:FtsH extracellular protease family 0