Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P33368 (3beta, 5beta)-pregn-16(17)-en-3-ol-20-one 3-O-alpha-l-arabinopyranosyl-(1-4)-beta-d-glucopyranosyl-(1-2)-beta-d-glucopyranoside 772.3798 773.3890 175
P37857 Dymacrin D 438.3482 439.3540 175
P40157 Cryptoporic acid C 832.4594 833.4660 175
P47127 (9Z,11E,13Z)-Octadeca-9,11,13-trienoylcarnitine 421.3172 422.3234 175
P47379 2-Amino-4-hydroxy-6,7-dimethyl-5,6,7,8-tetrahydropteridine 195.1146 196.1208 175
P49120 Leueantine B 623.3545 624.3611 175
P52537 Mycotoxin T 2 341.1479 342.1547 175
P00071 252.1318 253.1391 174
P04230 Finafloxacin 398.1387 399.1468 174
P05526 Monuron-TCA 198.0572 199.0630 174

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G225000 hypothetical protein NA 0
Glyma.20G225100 hypothetical protein NA 0
Glyma.20G225200 hypothetical protein NA 0
Glyma.20G225300 hypothetical protein NA 0
Glyma.20G225400 hypothetical protein NA 0
Glyma.20G225500 hypothetical protein AT1G08780:AIP3:ABI3-interacting protein 3 0
Glyma.20G225600 hypothetical protein AT1G08770:PRA1.E:prenylated RAB acceptor 1.E 0
Glyma.20G225800 hypothetical protein AT3G04690:ANX1:Malectin/receptor-like protein kinase family protein 0
Glyma.20G225900 hypothetical protein NA 0
Glyma.20G226000 hypothetical protein AT3G04630:WDL1:WVD2-like 1__AT5G28646:WVD2:TPX2 (targeting protein for Xklp2) protein family 0